If the desired site cannot be found in the natural sample, we can use cell engineering technology to edit specific chromosomal locations. The edited cell line has clear breakpoints and is completely identical to the natural sequence, enabling stable detection at the RNA level and testing the sensitivity, specificity, and stability of fusion gene detection.
The process is as follows:
1. Cell Engineering: In vitro synthesis of the fusion gene fragment and transfer into a natural cell sample to generate cells containing the fusion variant;
2. Amplification: Cell culture and passage amplification;
3. Extraction: RNA is extracted from the amplified cells;
4. Validation: Quality control verification is performed using Sanger sequencing and digital PCR. If fusion %AF or copy number testing is required, we also perform dPCR verification.